Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Gm13351-201ENSMUST00000118087 414 ntBASIC16.96■□□□□ 0.31
Scaf11E9PZM7 Gm5419-201ENSMUST00000119301 527 ntBASIC16.96■□□□□ 0.31
Scaf11E9PZM7 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
Scaf11E9PZM7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scaf11E9PZM7 Gm29763-201ENSMUST00000205306 616 ntBASIC16.96■□□□□ 0.31
Scaf11E9PZM7 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Scaf11E9PZM7 CT030135.2-201ENSMUST00000225255 893 ntBASIC16.96■□□□□ 0.31
Scaf11E9PZM7 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Scaf11E9PZM7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Scaf11E9PZM7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scaf11E9PZM7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scaf11E9PZM7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scaf11E9PZM7 Gm6210-201ENSMUST00000204734 1942 ntBASIC16.96■□□□□ 0.31
Scaf11E9PZM7 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scaf11E9PZM7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Scaf11E9PZM7 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scaf11E9PZM7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Scaf11E9PZM7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Scaf11E9PZM7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Scaf11E9PZM7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Scaf11E9PZM7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Scaf11E9PZM7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Gm8451-201ENSMUST00000170338 447 ntBASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Gm7719-201ENSMUST00000182374 975 ntBASIC16.95■□□□□ 0.3
Scaf11E9PZM7 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Gm7536-201ENSMUST00000077389 444 ntBASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Gm5453-201ENSMUST00000080866 447 ntBASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Gm37861-201ENSMUST00000193534 2869 ntBASIC16.95■□□□□ 0.3
Scaf11E9PZM7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scaf11E9PZM7 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Gm13117-201ENSMUST00000120894 691 ntBASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Gm24248-201ENSMUST00000157321 322 ntBASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Gm38117-201ENSMUST00000194653 939 ntBASIC16.94■□□□□ 0.3
Scaf11E9PZM7 AC154305.4-201ENSMUST00000224520 614 ntBASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Gm43045-201ENSMUST00000198725 2095 ntBASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Scaf11E9PZM7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scaf11E9PZM7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scaf11E9PZM7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scaf11E9PZM7 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Scaf11E9PZM7 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Scaf11E9PZM7 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scaf11E9PZM7 AC238811.4-201ENSMUST00000178019 1246 ntBASIC16.93■□□□□ 0.3
Scaf11E9PZM7 AC238940.3-201ENSMUST00000178830 1246 ntBASIC16.93■□□□□ 0.3
Scaf11E9PZM7 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scaf11E9PZM7 Trav11n-201ENSMUST00000200113 343 ntBASIC16.93■□□□□ 0.3
Scaf11E9PZM7 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Scaf11E9PZM7 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms