Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Gm18466-201ENSMUST00000209147 499 ntBASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 AC154433.1-201ENSMUST00000224401 1183 ntBASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Mir6930-201ENSMUST00000183859 68 ntBASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Gm8956-201ENSMUST00000203939 825 ntBASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Gm43163-201ENSMUST00000196571 442 ntBASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a3E9PWQ3 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Gm14048-201ENSMUST00000121864 1268 ntBASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Gm26931-201ENSMUST00000182273 609 ntBASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms