Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.06□□□□□ -0.64
Shank1D3YZU1 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.06□□□□□ -0.64
Shank1D3YZU1 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.06□□□□□ -0.64
Shank1D3YZU1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Shank1D3YZU1 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Shank1D3YZU1 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.05□□□□□ -0.64
Shank1D3YZU1 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Shank1D3YZU1 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.05□□□□□ -0.64
Shank1D3YZU1 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shank1D3YZU1 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Gm13937-201ENSMUST00000121000 988 ntBASIC11.04□□□□□ -0.64
Shank1D3YZU1 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Mir1956-201ENSMUST00000157748 65 ntBASIC11.04□□□□□ -0.64
Shank1D3YZU1 Gm23085-201ENSMUST00000157849 293 ntBASIC11.04□□□□□ -0.64
Shank1D3YZU1 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Gm37028-201ENSMUST00000194276 107 ntBASIC11.04□□□□□ -0.64
Shank1D3YZU1 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.04□□□□□ -0.64
Shank1D3YZU1 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Gm12857-201ENSMUST00000117678 592 ntBASIC11.04□□□□□ -0.64
Shank1D3YZU1 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.04□□□□□ -0.64
Shank1D3YZU1 Gm16166-201ENSMUST00000118291 787 ntBASIC11.04□□□□□ -0.64
Shank1D3YZU1 Gm14724-201ENSMUST00000118400 537 ntBASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms