Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm43547-201ENSMUST00000197729 328 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm5989-201ENSMUST00000096092 2077 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm18294-201ENSMUST00000176980 1748 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Chd6A3KFM7 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm6216-201ENSMUST00000182390 687 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm8436-201ENSMUST00000210152 1080 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm5749-201ENSMUST00000210673 1090 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 AC154252.2-201ENSMUST00000223593 767 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Cacna2d3-208ENSMUST00000225985 918 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm13910-201ENSMUST00000121752 1428 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Chd6A3KFM7 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Grk6-205ENSMUST00000224653 2976 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm8152-201ENSMUST00000120842 637 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm29548-201ENSMUST00000187012 694 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm28105-201ENSMUST00000187788 694 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm7701-201ENSMUST00000163185 1479 ntBASIC9.9□□□□□ -0.82
Chd6A3KFM7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 AC158777.1-201ENSMUST00000226216 1724 ntBASIC9.9□□□□□ -0.82
Chd6A3KFM7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 AU015228-201ENSMUST00000121103 1320 ntBASIC9.9□□□□□ -0.82
Chd6A3KFM7 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC9.9□□□□□ -0.82
Chd6A3KFM7 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Chd6A3KFM7 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC9.9□□□□□ -0.82
Chd6A3KFM7 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
Chd6A3KFM7 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Gm6606-201ENSMUST00000193613 947 ntBASIC9.9□□□□□ -0.82
Chd6A3KFM7 Gm30671-201ENSMUST00000214898 318 ntBASIC9.9□□□□□ -0.82
Chd6A3KFM7 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC9.9□□□□□ -0.82
Chd6A3KFM7 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC9.9□□□□□ -0.82
Chd6A3KFM7 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms