Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.11□□□□□ -0.79
Trav18A0A075B656 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.11□□□□□ -0.79
Trav18A0A075B656 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Gm24136-201ENSMUST00000083374 165 ntBASIC10.11□□□□□ -0.79
Trav18A0A075B656 Gm10268-201ENSMUST00000085340 555 ntBASIC10.11□□□□□ -0.79
Trav18A0A075B656 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav18A0A075B656 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.1□□□□□ -0.79
Trav18A0A075B656 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.1□□□□□ -0.79
Trav18A0A075B656 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.1□□□□□ -0.79
Trav18A0A075B656 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Gm27682-201ENSMUST00000183930 110 ntBASIC10.1□□□□□ -0.79
Trav18A0A075B656 Gm29649-201ENSMUST00000185649 419 ntBASIC10.1□□□□□ -0.79
Trav18A0A075B656 Gm42599-201ENSMUST00000201308 469 ntBASIC10.1□□□□□ -0.79
Trav18A0A075B656 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav18A0A075B656 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav18A0A075B656 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.1□□□□□ -0.79
Trav18A0A075B656 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms