Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Gm8385-201ENSMUST00000058999 643 ntBASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Gm13296-201ENSMUST00000117854 997 ntBASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Gm12217-201ENSMUST00000118858 696 ntBASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Gm14832-201ENSMUST00000121289 322 ntBASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Mir5120-201ENSMUST00000175020 78 ntBASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Mir6927-201ENSMUST00000184494 71 ntBASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Gzmn-202ENSMUST00000225535 989 ntBASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lhx9Q9WUH2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Gm13996-201ENSMUST00000118456 430 ntBASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Gm24845-201ENSMUST00000158034 109 ntBASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Gm28882-201ENSMUST00000185504 314 ntBASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Rprl1-202ENSMUST00000198476 238 ntBASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lhx9Q9WUH2 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms