Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
ClcnkaQ9WUB7 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Gm11964-201ENSMUST00000120982 444 ntBASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Gm24548-201ENSMUST00000158650 108 ntBASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Gm45880-201ENSMUST00000213041 853 ntBASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.41□□□□□ -0.58
ClcnkaQ9WUB7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Gm6023-201ENSMUST00000118217 606 ntBASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Rmrp-201ENSMUST00000157463 271 ntBASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Gm27390-201ENSMUST00000184516 176 ntBASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Gm38002-201ENSMUST00000193255 180 ntBASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Gm45925-201ENSMUST00000218882 744 ntBASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms