Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Gm11793-201ENSMUST00000120433 981 ntBASIC11.01□□□□□ -0.65
Nubp2Q9R061 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.01□□□□□ -0.65
Nubp2Q9R061 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Gm18584-201ENSMUST00000203098 964 ntBASIC11.01□□□□□ -0.65
Nubp2Q9R061 Gm44124-201ENSMUST00000204159 472 ntBASIC11.01□□□□□ -0.65
Nubp2Q9R061 Gm18935-201ENSMUST00000212692 664 ntBASIC11.01□□□□□ -0.65
Nubp2Q9R061 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.01□□□□□ -0.65
Nubp2Q9R061 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nubp2Q9R061 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Nubp2Q9R061 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nubp2Q9R061 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Nubp2Q9R061 Gm8617-201ENSMUST00000118796 2222 ntBASIC11□□□□□ -0.65
Nubp2Q9R061 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Nubp2Q9R061 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11□□□□□ -0.65
Nubp2Q9R061 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11□□□□□ -0.65
Nubp2Q9R061 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11□□□□□ -0.65
Nubp2Q9R061 Gm7809-201ENSMUST00000153199 742 ntBASIC11□□□□□ -0.65
Nubp2Q9R061 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Gm5850-201ENSMUST00000192923 1206 ntBASIC11□□□□□ -0.65
Nubp2Q9R061 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11□□□□□ -0.65
Nubp2Q9R061 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11□□□□□ -0.65
Nubp2Q9R061 Gm3961-201ENSMUST00000204425 994 ntBASIC11□□□□□ -0.65
Nubp2Q9R061 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11□□□□□ -0.65
Nubp2Q9R061 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11□□□□□ -0.65
Nubp2Q9R061 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11□□□□□ -0.65
Nubp2Q9R061 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nubp2Q9R061 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nubp2Q9R061 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nubp2Q9R061 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.99□□□□□ -0.65
Nubp2Q9R061 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.99□□□□□ -0.65
Nubp2Q9R061 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.99□□□□□ -0.65
Nubp2Q9R061 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Nubp2Q9R061 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.99□□□□□ -0.65
Nubp2Q9R061 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.99□□□□□ -0.65
Nubp2Q9R061 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms