Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Gm15610-201ENSMUST00000120584 195 ntBASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Gm15982-201ENSMUST00000121681 554 ntBASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Gm16030-201ENSMUST00000159098 603 ntBASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Gm5996-201ENSMUST00000211110 718 ntBASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a4Q9QZR9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Gm15196-201ENSMUST00000121406 482 ntBASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Gm3329-201ENSMUST00000159873 556 ntBASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms