Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Gm11591-201ENSMUST00000120063 702 ntBASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Gm42693-201ENSMUST00000196779 631 ntBASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Gm19184-201ENSMUST00000196798 928 ntBASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Gm18054-201ENSMUST00000207539 555 ntBASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Gm9899-201ENSMUST00000065519 555 ntBASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Snora73a-201ENSMUST00000082453 205 ntBASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sec61a2Q9JLR1 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sec61a2Q9JLR1 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Matn2-203ENSMUST00000226766 3252 ntBASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Gm12502-201ENSMUST00000120197 444 ntBASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Gm13323-201ENSMUST00000120245 1151 ntBASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Gm7809-201ENSMUST00000153199 742 ntBASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Gm38002-201ENSMUST00000193255 180 ntBASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Gm24526-201ENSMUST00000082921 158 ntBASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Gm26035-201ENSMUST00000083065 308 ntBASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a2Q9JLR1 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a2Q9JLR1 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a2Q9JLR1 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a2Q9JLR1 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms