Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm5070-201ENSMUST00000177599 862 ntBASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Upk3aQ9JKX8 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Gm14247-201ENSMUST00000120950 237 ntBASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Gm9230-201ENSMUST00000188228 532 ntBASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 AA914427-201ENSMUST00000193194 1166 ntBASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Gzmn-202ENSMUST00000225535 989 ntBASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk3aQ9JKX8 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms