Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Gm38341-201ENSMUST00000195357 515 ntBASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ldb3Q9JKS4 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Gm24830-201ENSMUST00000102024 166 ntBASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Gm15547-201ENSMUST00000122152 333 ntBASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Gm4034-201ENSMUST00000187674 480 ntBASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Gm31256-201ENSMUST00000194705 506 ntBASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Gm43822-201ENSMUST00000200285 476 ntBASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Gm3961-201ENSMUST00000204425 994 ntBASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Gm26232-201ENSMUST00000083360 166 ntBASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ldb3Q9JKS4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Gm19994-201ENSMUST00000217086 586 ntBASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms