Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1cQ9ES64 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1cQ9ES64 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1cQ9ES64 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC14.17□□□□□ -0.14
Ush1cQ9ES64 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.17□□□□□ -0.14
Ush1cQ9ES64 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Gm14928-201ENSMUST00000120198 477 ntBASIC14.16□□□□□ -0.14
Ush1cQ9ES64 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Gm28631-201ENSMUST00000190740 334 ntBASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1cQ9ES64 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Gm9794-201ENSMUST00000202370 423 ntBASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Gm19078-201ENSMUST00000206311 727 ntBASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Gm26035-201ENSMUST00000083065 308 ntBASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Cog3-203ENSMUST00000227473 4197 ntBASIC14.15□□□□□ -0.14
Ush1cQ9ES64 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Gm11524-201ENSMUST00000119349 807 ntBASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ush1cQ9ES64 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms