Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Gm9797-201ENSMUST00000052902 613 ntBASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Gm24447-201ENSMUST00000083977 338 ntBASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube4bQ9ES00 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ube4bQ9ES00 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms