Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn3Q9DCB1 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn3Q9DCB1 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn3Q9DCB1 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn3Q9DCB1 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.59□□□□□ -0.55
Hmgn3Q9DCB1 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Hmgn3Q9DCB1 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Hmgn3Q9DCB1 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Hmgn3Q9DCB1 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Btrc-209ENSMUST00000224478 2194 ntBASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Gm29667-201ENSMUST00000190817 490 ntBASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn3Q9DCB1 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Gm12151-201ENSMUST00000121374 290 ntBASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Mir8102-201ENSMUST00000184148 139 ntBASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Gm38223-201ENSMUST00000194484 695 ntBASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms