Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cpne8Q9DC53 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.86□□□□□ -0.35
Cpne8Q9DC53 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.86□□□□□ -0.35
Cpne8Q9DC53 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne8Q9DC53 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.86□□□□□ -0.35
Cpne8Q9DC53 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Cpne8Q9DC53 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.86□□□□□ -0.35
Cpne8Q9DC53 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cpne8Q9DC53 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne8Q9DC53 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne8Q9DC53 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne8Q9DC53 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne8Q9DC53 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne8Q9DC53 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cpne8Q9DC53 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne8Q9DC53 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Gm14999-201ENSMUST00000121039 624 ntBASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Gm16379-201ENSMUST00000161469 348 ntBASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Gm8762-201ENSMUST00000193486 339 ntBASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.85□□□□□ -0.35
Cpne8Q9DC53 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne8Q9DC53 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.84□□□□□ -0.35
Cpne8Q9DC53 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Gm4034-201ENSMUST00000187674 480 ntBASIC12.84□□□□□ -0.35
Cpne8Q9DC53 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Gm18187-201ENSMUST00000196476 984 ntBASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne8Q9DC53 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cpne8Q9DC53 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne8Q9DC53 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne8Q9DC53 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne8Q9DC53 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne8Q9DC53 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cpne8Q9DC53 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne8Q9DC53 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne8Q9DC53 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne8Q9DC53 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne8Q9DC53 Paupar-201ENSMUST00000194826 3482 ntBASIC12.83□□□□□ -0.36
Cpne8Q9DC53 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cpne8Q9DC53 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne8Q9DC53 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cpne8Q9DC53 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms