Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4bQ9D8B3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.57■□□□□ 0.08
Chmp4bQ9D8B3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Chmp4bQ9D8B3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4bQ9D8B3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Chmp4bQ9D8B3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 AY702102-202ENSMUST00000194651 1173 ntBASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Gm42693-201ENSMUST00000196779 631 ntBASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Gm39404-201ENSMUST00000216350 313 ntBASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4bQ9D8B3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Gm38002-201ENSMUST00000193255 180 ntBASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Gm25857-201ENSMUST00000082788 129 ntBASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Gm7224-201ENSMUST00000121359 2066 ntBASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chmp4bQ9D8B3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Gm24830-201ENSMUST00000102024 166 ntBASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Gm23912-201ENSMUST00000104687 87 ntBASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Gm26232-201ENSMUST00000083360 166 ntBASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Pck2-205ENSMUST00000226352 2784 ntBASIC15.54■□□□□ 0.08
Chmp4bQ9D8B3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms