Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Gm15693-201ENSMUST00000120470 637 ntBASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Gm12291-201ENSMUST00000121627 311 ntBASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Gm14005-208ENSMUST00000223654 681 ntBASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.34□□□□□ -0.59
Upk3bl1Q9D701 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Upk3bl1Q9D701 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Upk3bl1Q9D701 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Gm23935-201ENSMUST00000102303 57 ntBASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Gm24270-201ENSMUST00000102326 57 ntBASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Gm24245-201ENSMUST00000157318 57 ntBASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Gm25144-201ENSMUST00000179561 110 ntBASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Gm25352-201ENSMUST00000179815 110 ntBASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Gm29011-201ENSMUST00000191059 712 ntBASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Gm29288-201ENSMUST00000191582 901 ntBASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Gm6458-201ENSMUST00000211573 635 ntBASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 AC159205.7-201ENSMUST00000225988 692 ntBASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3bl1Q9D701 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms