Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 AW822252-206ENSMUST00000208904 237 ntBASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Gm7775-201ENSMUST00000218871 853 ntBASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Gm8227-201ENSMUST00000223306 571 ntBASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Gm14350-201ENSMUST00000116642 640 ntBASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Gm13689-201ENSMUST00000119360 685 ntBASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Gm14767-201ENSMUST00000121559 586 ntBASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Gm5312-201ENSMUST00000203728 547 ntBASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.47□□□□□ -0.41
Sf3a3Q9D554 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Mir339-201ENSMUST00000083659 96 ntBASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3a3Q9D554 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Sf3a3Q9D554 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3a3Q9D554 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3a3Q9D554 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3a3Q9D554 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3a3Q9D554 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3a3Q9D554 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3a3Q9D554 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3a3Q9D554 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.45□□□□□ -0.42
Sf3a3Q9D554 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms