Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Gm9062-201ENSMUST00000117712 727 ntBASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Gm13611-201ENSMUST00000118269 318 ntBASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.71□□□□□ -0.06
Stag1Q9D3E6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Stag1Q9D3E6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Stag1Q9D3E6 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Stag1Q9D3E6 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.71□□□□□ -0.06
Stag1Q9D3E6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Stag1Q9D3E6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Gm15515-201ENSMUST00000117827 822 ntBASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Gm24514-201ENSMUST00000174961 285 ntBASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.7□□□□□ -0.06
Stag1Q9D3E6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Stag1Q9D3E6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Gm45118-201ENSMUST00000208928 825 ntBASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Gm17827-201ENSMUST00000211825 742 ntBASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Gm5455-201ENSMUST00000058710 715 ntBASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms