Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Gm5187-201ENSMUST00000117317 991 ntBASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Gm37008-201ENSMUST00000195712 319 ntBASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Gm18584-201ENSMUST00000203098 964 ntBASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Gm32025-201ENSMUST00000217960 307 ntBASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Snord83b-201ENSMUST00000104546 94 ntBASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Gm10478-201ENSMUST00000084451 396 ntBASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shmt2Q9CZN7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt2Q9CZN7 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt2Q9CZN7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.79□□□□□ -0.52
Shmt2Q9CZN7 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt2Q9CZN7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt2Q9CZN7 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt2Q9CZN7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt2Q9CZN7 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt2Q9CZN7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt2Q9CZN7 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Shmt2Q9CZN7 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt2Q9CZN7 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt2Q9CZN7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms