Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Hdhd3Q9CYW4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Hdhd3Q9CYW4 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Hdhd3Q9CYW4 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Hdhd3Q9CYW4 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Hdhd3Q9CYW4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Hdhd3Q9CYW4 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Hdhd3Q9CYW4 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Hdhd3Q9CYW4 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Hdhd3Q9CYW4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Hdhd3Q9CYW4 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Gm8805-201ENSMUST00000117848 313 ntBASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.02□□□□□ -0.81
Hdhd3Q9CYW4 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Gm23363-201ENSMUST00000175024 79 ntBASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Hdhd3Q9CYW4 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 149.3 ms