Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Nip7Q9CXK8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nip7Q9CXK8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nip7Q9CXK8 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nip7Q9CXK8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nip7Q9CXK8 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nip7Q9CXK8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.33■□□□□ 0.04
Nip7Q9CXK8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nip7Q9CXK8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nip7Q9CXK8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nip7Q9CXK8 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nip7Q9CXK8 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Nip7Q9CXK8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Gm9540-201ENSMUST00000188230 478 ntBASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Gm9132-201ENSMUST00000210182 832 ntBASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Gm9785-201ENSMUST00000062642 1006 ntBASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nip7Q9CXK8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC15.31■□□□□ 0.04
Nip7Q9CXK8 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Gm45550-201ENSMUST00000209380 946 ntBASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Gm9797-202ENSMUST00000218003 294 ntBASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Gm21998-201ENSMUST00000117552 1308 ntBASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Gm18782-201ENSMUST00000209023 1399 ntBASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nip7Q9CXK8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nip7Q9CXK8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nip7Q9CXK8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Nip7Q9CXK8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nip7Q9CXK8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nip7Q9CXK8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nip7Q9CXK8 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nip7Q9CXK8 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nip7Q9CXK8 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC15.3■□□□□ 0.04
Nip7Q9CXK8 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.3■□□□□ 0.04
Nip7Q9CXK8 Gm19287-201ENSMUST00000203190 358 ntBASIC15.3■□□□□ 0.04
Nip7Q9CXK8 Gm8956-201ENSMUST00000203939 825 ntBASIC15.3■□□□□ 0.04
Nip7Q9CXK8 Gm45398-201ENSMUST00000210561 165 ntBASIC15.3■□□□□ 0.04
Nip7Q9CXK8 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.3■□□□□ 0.04
Nip7Q9CXK8 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC15.3■□□□□ 0.04
Nip7Q9CXK8 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nip7Q9CXK8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nip7Q9CXK8 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nip7Q9CXK8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.3■□□□□ 0.04
Nip7Q9CXK8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nip7Q9CXK8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms