Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Gm13315-201ENSMUST00000120376 991 ntBASIC14.51□□□□□ -0.09
Smc3Q9CW03 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.51□□□□□ -0.09
Smc3Q9CW03 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.5□□□□□ -0.09
Smc3Q9CW03 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Gm1335-201ENSMUST00000121653 386 ntBASIC14.5□□□□□ -0.09
Smc3Q9CW03 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Gm8018-201ENSMUST00000173536 789 ntBASIC14.5□□□□□ -0.09
Smc3Q9CW03 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.5□□□□□ -0.09
Smc3Q9CW03 Gm6007-201ENSMUST00000208170 823 ntBASIC14.5□□□□□ -0.09
Smc3Q9CW03 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Gm22058-201ENSMUST00000083393 310 ntBASIC14.5□□□□□ -0.09
Smc3Q9CW03 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Smc3Q9CW03 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Paupar-201ENSMUST00000194826 3482 ntBASIC14.5□□□□□ -0.09
Smc3Q9CW03 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc3Q9CW03 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.49□□□□□ -0.09
Smc3Q9CW03 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Smc3Q9CW03 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.49□□□□□ -0.09
Smc3Q9CW03 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smc3Q9CW03 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms