Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldnd1Q9CQX5 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldnd1Q9CQX5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Gm5705-201ENSMUST00000066241 711 ntBASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldnd1Q9CQX5 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Gm13916-201ENSMUST00000117368 628 ntBASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldnd1Q9CQX5 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cldnd1Q9CQX5 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cldnd1Q9CQX5 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cldnd1Q9CQX5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cldnd1Q9CQX5 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cldnd1Q9CQX5 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cldnd1Q9CQX5 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.58□□□□□ -0.39
Cldnd1Q9CQX5 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Gm26013-201ENSMUST00000104404 119 ntBASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms