Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retreg3Q9CQV4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retreg3Q9CQV4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Retreg3Q9CQV4 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retreg3Q9CQV4 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Retreg3Q9CQV4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retreg3Q9CQV4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retreg3Q9CQV4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retreg3Q9CQV4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Retreg3Q9CQV4 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Gm38283-201ENSMUST00000193041 695 ntBASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Gm37008-201ENSMUST00000195712 319 ntBASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Gm7783-201ENSMUST00000204795 781 ntBASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 AC161250.1-201ENSMUST00000213426 1111 ntBASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 AC153532.1-201ENSMUST00000218126 1111 ntBASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retreg3Q9CQV4 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm12502-201ENSMUST00000120197 444 ntBASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm15595-201ENSMUST00000120840 961 ntBASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm13342-201ENSMUST00000121055 207 ntBASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm12978-201ENSMUST00000121250 522 ntBASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm8738-201ENSMUST00000172606 329 ntBASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm4207-201ENSMUST00000173144 960 ntBASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm27039-201ENSMUST00000182438 962 ntBASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm28926-201ENSMUST00000191063 680 ntBASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm18584-201ENSMUST00000203098 964 ntBASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 AC154515.3-201ENSMUST00000225081 1159 ntBASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm44509-201ENSMUST00000205400 1324 ntBASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm44746-201ENSMUST00000205565 1349 ntBASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Retreg3Q9CQV4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms