Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
RTRAFQ9CQE8 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.02□□□□□ -0.8
RTRAFQ9CQE8 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
RTRAFQ9CQE8 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
RTRAFQ9CQE8 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
RTRAFQ9CQE8 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
RTRAFQ9CQE8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
RTRAFQ9CQE8 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Gm14767-201ENSMUST00000121559 586 ntBASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Gm25911-201ENSMUST00000157621 56 ntBASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Gm8000-201ENSMUST00000188378 592 ntBASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTRAFQ9CQE8 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RTRAFQ9CQE8 Gm27525-201ENSMUST00000184465 107 ntBASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms