Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Chchd1Q9CQA6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Chchd1Q9CQA6 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Chchd1Q9CQA6 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chchd1Q9CQA6 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Gm42690-201ENSMUST00000197921 1836 ntBASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Gm12017-201ENSMUST00000122453 1003 ntBASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Dupd1-202ENSMUST00000224735 548 ntBASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Gm37015-201ENSMUST00000192763 1521 ntBASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.24□□□□□ -0.93
Chchd1Q9CQA6 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Gm10231-201ENSMUST00000181584 441 ntBASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Gm10766-202ENSMUST00000194123 606 ntBASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Gm10175-202ENSMUST00000208752 441 ntBASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Chchd1Q9CQA6 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms