Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim33Q99PP7 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Gm43118-201ENSMUST00000199149 775 ntBASIC12.34□□□□□ -0.43
Trim33Q99PP7 Gm5904-201ENSMUST00000210286 865 ntBASIC12.34□□□□□ -0.43
Trim33Q99PP7 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.34□□□□□ -0.43
Trim33Q99PP7 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.34□□□□□ -0.43
Trim33Q99PP7 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim33Q99PP7 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim33Q99PP7 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Gm38158-201ENSMUST00000194617 339 ntBASIC12.33□□□□□ -0.44
Trim33Q99PP7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Gm22058-201ENSMUST00000083393 310 ntBASIC12.33□□□□□ -0.44
Trim33Q99PP7 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim33Q99PP7 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.33□□□□□ -0.44
Trim33Q99PP7 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim33Q99PP7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.33□□□□□ -0.44
Trim33Q99PP7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Daam2-202ENSMUST00000224595 1926 ntBASIC12.33□□□□□ -0.44
Trim33Q99PP7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.33□□□□□ -0.44
Trim33Q99PP7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim33Q99PP7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.32□□□□□ -0.44
Trim33Q99PP7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms