Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm24231-201ENSMUST00000104315 133 ntBASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Rubie-203ENSMUST00000227803 2430 ntBASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd1Q99MH6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Gm32025-201ENSMUST00000217960 307 ntBASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd1Q99MH6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms