Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.87□□□□□ -0.67
Scrt1Q99M85 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.87□□□□□ -0.67
Scrt1Q99M85 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.86□□□□□ -0.67
Scrt1Q99M85 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Gm9062-201ENSMUST00000117712 727 ntBASIC10.86□□□□□ -0.67
Scrt1Q99M85 Gm15131-201ENSMUST00000119124 595 ntBASIC10.86□□□□□ -0.67
Scrt1Q99M85 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.86□□□□□ -0.67
Scrt1Q99M85 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Gm17040-202ENSMUST00000170597 889 ntBASIC10.86□□□□□ -0.67
Scrt1Q99M85 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Gm5070-201ENSMUST00000177599 862 ntBASIC10.86□□□□□ -0.67
Scrt1Q99M85 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Gm37201-201ENSMUST00000191845 523 ntBASIC10.86□□□□□ -0.67
Scrt1Q99M85 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.86□□□□□ -0.67
Scrt1Q99M85 Gm7848-201ENSMUST00000210739 718 ntBASIC10.86□□□□□ -0.67
Scrt1Q99M85 AC122876.1-201ENSMUST00000217619 825 ntBASIC10.86□□□□□ -0.67
Scrt1Q99M85 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.86□□□□□ -0.67
Scrt1Q99M85 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Gm10312-201ENSMUST00000078515 489 ntBASIC10.86□□□□□ -0.67
Scrt1Q99M85 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.86□□□□□ -0.67
Scrt1Q99M85 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scrt1Q99M85 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.85□□□□□ -0.67
Scrt1Q99M85 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.85□□□□□ -0.67
Scrt1Q99M85 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Gm4993-201ENSMUST00000118719 1174 ntBASIC10.85□□□□□ -0.67
Scrt1Q99M85 Selenot-ps-201ENSMUST00000119098 593 ntBASIC10.85□□□□□ -0.67
Scrt1Q99M85 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.85□□□□□ -0.67
Scrt1Q99M85 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Gm18730-201ENSMUST00000218038 343 ntBASIC10.85□□□□□ -0.67
Scrt1Q99M85 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms