Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.45□□□□□ -0.42
Cdk9Q99J95 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Gm12341-201ENSMUST00000119724 503 ntBASIC12.45□□□□□ -0.42
Cdk9Q99J95 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdk9Q99J95 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Gm44397-201ENSMUST00000195950 113 ntBASIC12.45□□□□□ -0.42
Cdk9Q99J95 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Gm7653-201ENSMUST00000214567 508 ntBASIC12.45□□□□□ -0.42
Cdk9Q99J95 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.44□□□□□ -0.42
Cdk9Q99J95 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Gm5687-201ENSMUST00000118252 640 ntBASIC12.44□□□□□ -0.42
Cdk9Q99J95 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.44□□□□□ -0.42
Cdk9Q99J95 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Gm6983-201ENSMUST00000214912 628 ntBASIC12.44□□□□□ -0.42
Cdk9Q99J95 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.44□□□□□ -0.42
Cdk9Q99J95 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.43□□□□□ -0.42
Cdk9Q99J95 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms