Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.29□□□□□ -0.12
Smc1bQ920F6 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.29□□□□□ -0.12
Smc1bQ920F6 Gm13492-201ENSMUST00000119772 665 ntBASIC14.29□□□□□ -0.12
Smc1bQ920F6 Gm13813-201ENSMUST00000120998 787 ntBASIC14.29□□□□□ -0.12
Smc1bQ920F6 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Gm27552-201ENSMUST00000183351 62 ntBASIC14.29□□□□□ -0.12
Smc1bQ920F6 Gm27844-201ENSMUST00000183613 62 ntBASIC14.29□□□□□ -0.12
Smc1bQ920F6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Gm8913-201ENSMUST00000209491 641 ntBASIC14.29□□□□□ -0.12
Smc1bQ920F6 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.29□□□□□ -0.12
Smc1bQ920F6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc1bQ920F6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.29□□□□□ -0.12
Smc1bQ920F6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Smc1bQ920F6 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.28□□□□□ -0.12
Smc1bQ920F6 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Gm25043-201ENSMUST00000158604 212 ntBASIC14.28□□□□□ -0.12
Smc1bQ920F6 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Smc1bQ920F6 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.28□□□□□ -0.12
Smc1bQ920F6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.28□□□□□ -0.12
Smc1bQ920F6 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Gm45433-201ENSMUST00000209386 247 ntBASIC14.28□□□□□ -0.12
Smc1bQ920F6 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.28□□□□□ -0.12
Smc1bQ920F6 Spcs1-203ENSMUST00000226374 592 ntBASIC14.28□□□□□ -0.12
Smc1bQ920F6 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc1bQ920F6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc1bQ920F6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc1bQ920F6 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc1bQ920F6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc1bQ920F6 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Smc1bQ920F6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc1bQ920F6 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Smc1bQ920F6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc1bQ920F6 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc1bQ920F6 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc1bQ920F6 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.27□□□□□ -0.12
Smc1bQ920F6 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smc1bQ920F6 Gm13296-201ENSMUST00000117854 997 ntBASIC14.27□□□□□ -0.13
Smc1bQ920F6 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.27□□□□□ -0.13
Smc1bQ920F6 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smc1bQ920F6 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.27□□□□□ -0.13
Smc1bQ920F6 Gm12266-201ENSMUST00000120311 962 ntBASIC14.27□□□□□ -0.13
Smc1bQ920F6 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.27□□□□□ -0.13
Smc1bQ920F6 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms