Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Gm8604-201ENSMUST00000183150 965 ntBASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Gm8023-201ENSMUST00000195298 903 ntBASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Gm8703-201ENSMUST00000203793 730 ntBASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Nme7-201ENSMUST00000086028 834 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Gpr33-201ENSMUST00000040161 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm14103-201ENSMUST00000119075 366 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm15057-201ENSMUST00000121516 534 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm16479-201ENSMUST00000121706 932 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm8062-201ENSMUST00000139696 444 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm17420-201ENSMUST00000164753 153 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm27514-201ENSMUST00000183692 110 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm18984-201ENSMUST00000193998 1124 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm37614-201ENSMUST00000195645 210 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm18598-201ENSMUST00000207724 597 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Olfr860-203ENSMUST00000212353 1030 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm19186-201ENSMUST00000219922 333 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 AC116465.1-201ENSMUST00000220324 235 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm9899-201ENSMUST00000065519 555 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Olfr1178-201ENSMUST00000075640 972 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 AC132384.7-201ENSMUST00000220198 1391 ntBASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb20Q91XZ9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms