Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm19078-201ENSMUST00000206311 727 ntBASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Gm15371-201ENSMUST00000117057 784 ntBASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Gm43438-201ENSMUST00000198133 379 ntBASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Zfp865-202ENSMUST00000076791 1129 ntBASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Gm38262-201ENSMUST00000194760 1382 ntBASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb3Q91XZ7 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb3Q91XZ7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.52□□□□□ -0.4
Pcdhb3Q91XZ7 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb3Q91XZ7 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb3Q91XZ7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb3Q91XZ7 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb3Q91XZ7 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb3Q91XZ7 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb3Q91XZ7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhb3Q91XZ7 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb3Q91XZ7 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Gm8312-201ENSMUST00000119380 618 ntBASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 CT030194.1-201ENSMUST00000225507 532 ntBASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 AC165260.4-201ENSMUST00000225924 724 ntBASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms