Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Gm8062-201ENSMUST00000139696 444 ntBASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Gm2639-201ENSMUST00000156881 1297 ntBASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Gm17420-201ENSMUST00000164753 153 ntBASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Gm38092-201ENSMUST00000195600 653 ntBASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 AC069562.3-201ENSMUST00000225387 587 ntBASIC12□□□□□ -0.49
Pcdhga11Q91XY8 AC140451.2-201ENSMUST00000228030 664 ntBASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Gm10268-201ENSMUST00000085340 555 ntBASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Gm44806-201ENSMUST00000205574 2303 ntBASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Gm7553-201ENSMUST00000185805 1426 ntBASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Gm44913-201ENSMUST00000208060 2990 ntBASIC12□□□□□ -0.49
Pcdhga11Q91XY8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Gm37424-201ENSMUST00000191727 561 ntBASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga11Q91XY8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms