Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Gm11597-201ENSMUST00000121423 964 ntBASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Gm16379-201ENSMUST00000161469 348 ntBASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Gm3890-201ENSMUST00000182416 207 ntBASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Gm27243-201ENSMUST00000183964 521 ntBASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Gm8762-201ENSMUST00000193486 339 ntBASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Gm44405-201ENSMUST00000198952 126 ntBASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Gm5781-201ENSMUST00000219792 443 ntBASIC10.35□□□□□ -0.75
H1fooQ8VIK3 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H1fooQ8VIK3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Gm14660-201ENSMUST00000119809 575 ntBASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Gm13315-201ENSMUST00000120376 991 ntBASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Gm45784-201ENSMUST00000188360 142 ntBASIC10.34□□□□□ -0.75
H1fooQ8VIK3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Gm45930-201ENSMUST00000221330 292 ntBASIC10.34□□□□□ -0.75
H1fooQ8VIK3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
H1fooQ8VIK3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms