Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Gm8738-201ENSMUST00000172606 329 ntBASIC11.85□□□□□ -0.51
Lsm1Q8VC85 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Gm4034-201ENSMUST00000187674 480 ntBASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Gm44405-201ENSMUST00000198952 126 ntBASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm1Q8VC85 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Gm13736-201ENSMUST00000119272 253 ntBASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Gm6222-202ENSMUST00000182143 629 ntBASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.84□□□□□ -0.51
Lsm1Q8VC85 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Gm5904-201ENSMUST00000210286 865 ntBASIC11.84□□□□□ -0.51
Lsm1Q8VC85 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Gm45925-201ENSMUST00000218882 744 ntBASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.84□□□□□ -0.51
Lsm1Q8VC85 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm1Q8VC85 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Lsm1Q8VC85 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms