Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Gm23912-201ENSMUST00000104687 87 ntBASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Mir1938-201ENSMUST00000158746 100 ntBASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Gm42599-201ENSMUST00000201308 469 ntBASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.54□□□□□ -0.24
Rpap2Q8VC34 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Gm8712-201ENSMUST00000221090 701 ntBASIC13.54□□□□□ -0.24
Rpap2Q8VC34 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.54□□□□□ -0.24
Rpap2Q8VC34 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Gm15547-201ENSMUST00000122152 333 ntBASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Gm31256-201ENSMUST00000194705 506 ntBASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Cts7-204ENSMUST00000225321 1257 ntBASIC13.53□□□□□ -0.24
Rpap2Q8VC34 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.53□□□□□ -0.24
Rpap2Q8VC34 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Gm9996-201ENSMUST00000070359 913 ntBASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpap2Q8VC34 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rpap2Q8VC34 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
Rpap2Q8VC34 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 125.3 ms