Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Gm6447-201ENSMUST00000118905 835 ntBASIC12.48□□□□□ -0.41
Slf1Q8R3P9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Gm15429-201ENSMUST00000151268 798 ntBASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slf1Q8R3P9 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slf1Q8R3P9 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Slf1Q8R3P9 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Slf1Q8R3P9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slf1Q8R3P9 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Slf1Q8R3P9 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Slf1Q8R3P9 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Slf1Q8R3P9 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Slf1Q8R3P9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slf1Q8R3P9 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slf1Q8R3P9 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Slf1Q8R3P9 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Slf1Q8R3P9 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.46□□□□□ -0.41
Slf1Q8R3P9 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slf1Q8R3P9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slf1Q8R3P9 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms