Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Gm8617-201ENSMUST00000118796 2222 ntBASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Gm5909-201ENSMUST00000119768 1281 ntBASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Gm12036-201ENSMUST00000120008 530 ntBASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 n-R5s84-201ENSMUST00000122591 109 ntBASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Gm18706-201ENSMUST00000210053 1066 ntBASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Gm18499-201ENSMUST00000220808 1021 ntBASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.07■□□□□ 0.16
Ddx54Q8K4L0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Gm24791-201ENSMUST00000104284 131 ntBASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Gm5638-201ENSMUST00000118618 1258 ntBASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Gm8723-201ENSMUST00000166076 820 ntBASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Gm8701-201ENSMUST00000169259 874 ntBASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Gm44647-201ENSMUST00000207402 428 ntBASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 AC154361.2-201ENSMUST00000224747 943 ntBASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 AC129308.3-201ENSMUST00000225652 524 ntBASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx54Q8K4L0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Gm22711-201ENSMUST00000116890 133 ntBASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Gm22146-201ENSMUST00000157397 288 ntBASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx54Q8K4L0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms