Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.93□□□□□ -0.18
Syne4Q8CII8 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.93□□□□□ -0.18
Syne4Q8CII8 Gm12899-201ENSMUST00000120565 551 ntBASIC13.93□□□□□ -0.18
Syne4Q8CII8 Gm13263-201ENSMUST00000121271 838 ntBASIC13.93□□□□□ -0.18
Syne4Q8CII8 Gm13182-201ENSMUST00000122241 312 ntBASIC13.93□□□□□ -0.18
Syne4Q8CII8 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.93□□□□□ -0.18
Syne4Q8CII8 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Gm6485-201ENSMUST00000160676 439 ntBASIC13.93□□□□□ -0.18
Syne4Q8CII8 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Gm8956-201ENSMUST00000203939 825 ntBASIC13.93□□□□□ -0.18
Syne4Q8CII8 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.93□□□□□ -0.18
Syne4Q8CII8 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.93□□□□□ -0.18
Syne4Q8CII8 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.93□□□□□ -0.18
Syne4Q8CII8 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Gm5705-201ENSMUST00000066241 711 ntBASIC13.93□□□□□ -0.18
Syne4Q8CII8 Gm25517-201ENSMUST00000083865 134 ntBASIC13.93□□□□□ -0.18
Syne4Q8CII8 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Gm11949-201ENSMUST00000117640 372 ntBASIC13.92□□□□□ -0.18
Syne4Q8CII8 Gm15352-201ENSMUST00000118696 270 ntBASIC13.92□□□□□ -0.18
Syne4Q8CII8 Gm8737-201ENSMUST00000122208 642 ntBASIC13.92□□□□□ -0.18
Syne4Q8CII8 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Gm25951-201ENSMUST00000175330 64 ntBASIC13.92□□□□□ -0.18
Syne4Q8CII8 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.92□□□□□ -0.18
Syne4Q8CII8 Gm9645-201ENSMUST00000197131 792 ntBASIC13.92□□□□□ -0.18
Syne4Q8CII8 Gm3793-201ENSMUST00000204973 672 ntBASIC13.92□□□□□ -0.18
Syne4Q8CII8 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.92□□□□□ -0.18
Syne4Q8CII8 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Syne4Q8CII8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.91□□□□□ -0.18
Syne4Q8CII8 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.91□□□□□ -0.18
Syne4Q8CII8 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.91□□□□□ -0.18
Syne4Q8CII8 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.91□□□□□ -0.18
Syne4Q8CII8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms