Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Mir181d-201ENSMUST00000102383 72 ntBASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Gm24231-201ENSMUST00000104315 133 ntBASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Gm18367-201ENSMUST00000176139 600 ntBASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Trav11n-201ENSMUST00000200113 343 ntBASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Zc3h3Q8CHP0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Zc3h3Q8CHP0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Zc3h3Q8CHP0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Zc3h3Q8CHP0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Zc3h3Q8CHP0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Zc3h3Q8CHP0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Zc3h3Q8CHP0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Zc3h3Q8CHP0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Gm14807-201ENSMUST00000116640 983 ntBASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Gm5870-201ENSMUST00000196461 282 ntBASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zc3h3Q8CHP0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Gm23119-201ENSMUST00000158610 140 ntBASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Gm8723-201ENSMUST00000166076 820 ntBASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Gm8701-201ENSMUST00000169259 874 ntBASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Gm26134-201ENSMUST00000178484 110 ntBASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.01□□□□□ -0.49
Zc3h3Q8CHP0 Gm43852-201ENSMUST00000202098 917 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms