Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12□□□□□ -0.49
Rdh1Q8CGV4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Gm18730-201ENSMUST00000218038 343 ntBASIC12□□□□□ -0.49
Rdh1Q8CGV4 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 CT025694.1-201ENSMUST00000226188 934 ntBASIC12□□□□□ -0.49
Rdh1Q8CGV4 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12□□□□□ -0.49
Rdh1Q8CGV4 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Gm45003-201ENSMUST00000205875 2158 ntBASIC12□□□□□ -0.49
Rdh1Q8CGV4 Gm43364-201ENSMUST00000196046 3274 ntBASIC12□□□□□ -0.49
Rdh1Q8CGV4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Rdh1Q8CGV4 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Gm23200-201ENSMUST00000104379 132 ntBASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 AY036118-201ENSMUST00000200021 923 ntBASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rdh1Q8CGV4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Gm5616-201ENSMUST00000165252 384 ntBASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Gm8741-201ENSMUST00000174736 384 ntBASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Gm43962-201ENSMUST00000203898 190 ntBASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms