Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Gm14350-201ENSMUST00000116642 640 ntBASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Gm12742-201ENSMUST00000117326 410 ntBASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Mir1938-201ENSMUST00000158746 100 ntBASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Gm29127-201ENSMUST00000188304 517 ntBASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Gm6458-201ENSMUST00000211573 635 ntBASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Mir339-201ENSMUST00000083659 96 ntBASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrif1Q8CDD9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Gm10156-201ENSMUST00000122364 462 ntBASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Gm9899-201ENSMUST00000065519 555 ntBASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lrif1Q8CDD9 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lrif1Q8CDD9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lrif1Q8CDD9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lrif1Q8CDD9 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lrif1Q8CDD9 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Lrif1Q8CDD9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lrif1Q8CDD9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lrif1Q8CDD9 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lrif1Q8CDD9 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms