Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Olfr582-201ENSMUST00000098212 960 ntBASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Matn2-203ENSMUST00000226766 3252 ntBASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Gm12164-201ENSMUST00000121695 551 ntBASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Gm27046-201ENSMUST00000182160 463 ntBASIC14.41□□□□□ -0.1
Usp44Q8C2S0 AA914427-201ENSMUST00000193194 1166 ntBASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp44Q8C2S0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Gm13350-201ENSMUST00000120519 479 ntBASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms