Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Mir6546-201ENSMUST00000184460 62 ntBASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Gm18893-201ENSMUST00000198416 943 ntBASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 AC132901.1-201ENSMUST00000224345 508 ntBASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Gm25881-201ENSMUST00000157783 103 ntBASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Rn7s6-201ENSMUST00000175005 291 ntBASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Gm4607-201ENSMUST00000206649 577 ntBASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 AC099645.1-201ENSMUST00000226476 1105 ntBASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 AC133602.1-201ENSMUST00000227510 509 ntBASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptcd1Q8C2E4 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Gm18626-201ENSMUST00000221512 1409 ntBASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Gm9358-201ENSMUST00000183067 927 ntBASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 AC124457.1-201ENSMUST00000198845 120 ntBASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ptcd1Q8C2E4 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ptcd1Q8C2E4 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC15.21■□□□□ 0.02
Ptcd1Q8C2E4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ptcd1Q8C2E4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Ptcd1Q8C2E4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ptcd1Q8C2E4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ptcd1Q8C2E4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ptcd1Q8C2E4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ptcd1Q8C2E4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ptcd1Q8C2E4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms