Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Gm13665-201ENSMUST00000120830 528 ntBASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Gm13366-201ENSMUST00000122198 970 ntBASIC13.71□□□□□ -0.21
Trim47Q8C0E3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Rprl1-202ENSMUST00000198476 238 ntBASIC13.71□□□□□ -0.21
Trim47Q8C0E3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Gm44651-201ENSMUST00000207343 372 ntBASIC13.71□□□□□ -0.21
Trim47Q8C0E3 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Mir433-201ENSMUST00000093564 124 ntBASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim47Q8C0E3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim47Q8C0E3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim47Q8C0E3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trim47Q8C0E3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim47Q8C0E3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim47Q8C0E3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim47Q8C0E3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim47Q8C0E3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim47Q8C0E3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim47Q8C0E3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Gm12997-201ENSMUST00000120207 640 ntBASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Gm19994-201ENSMUST00000217086 586 ntBASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim47Q8C0E3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Gm9630-201ENSMUST00000178304 885 ntBASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim47Q8C0E3 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms