Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Gm24934-201ENSMUST00000103764 111 ntBASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Gm25214-201ENSMUST00000104573 129 ntBASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Gm11531-201ENSMUST00000117614 555 ntBASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Gm10608-202ENSMUST00000213924 676 ntBASIC12.72□□□□□ -0.37
Trub1Q8C0D0 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trub1Q8C0D0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.72□□□□□ -0.37
Trub1Q8C0D0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Gm24845-201ENSMUST00000158034 109 ntBASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trub1Q8C0D0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trub1Q8C0D0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trub1Q8C0D0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trub1Q8C0D0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trub1Q8C0D0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.71□□□□□ -0.38
Trub1Q8C0D0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Trub1Q8C0D0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms