Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.52□□□□□ -0.4
Sh3rf2Q8BZT2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sh3rf2Q8BZT2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sh3rf2Q8BZT2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sh3rf2Q8BZT2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Sh3rf2Q8BZT2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sh3rf2Q8BZT2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sh3rf2Q8BZT2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh3rf2Q8BZT2 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 AU022133-201ENSMUST00000200601 873 ntBASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Gm43962-201ENSMUST00000203898 190 ntBASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh3rf2Q8BZT2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Gm22133-201ENSMUST00000102082 109 ntBASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Gm43378-201ENSMUST00000199336 582 ntBASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms